STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ73805.1PFAM: Armadillo/beta-catenin-like repeat. (573 aa)    
Predicted Functional Partners:
eif5a
Translation initiation factor eIF-5A; Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family.
  
 0.804
AFZ73804.1
PFAM: ADP-ribosylglycohydrolase; TIGRFAM: ADP-ribosyl-[dinitrogen reductase] hydrolase.
  
    0.791
AFZ74897.1
PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: Iron-sulfur cluster assembly accessory protein.
  
 
 
 0.582
AFZ72243.1
Putative nucleic acid-binding protein with PIN domain and Zn ribbon.
  
    0.524
guaAB
GMP synthase, glutamine-hydrolyzing, C-terminal domain or B subunit; Catalyzes the synthesis of GMP from XMP.
  
    0.519
AFZ72104.1
NADH:ubiquinone oxidoreductase subunit 1 (chain H); PFAM: NADH dehydrogenase.
   
    0.514
rps8e
PFAM: Ribosomal protein S8e; TIGRFAM: ribosomal protein S8.e.
   
    0.505
AFZ72100.1
NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K); PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L.
   
    0.499
AFZ72204.1
tRNA(1-methyladenosine) methyltransferase-like methyltransferase.
   
    0.499
AFZ73210.1
Putative GTPase; PFAM: Nucleolar GTP-binding protein 1 (NOG1); TIGRFAM: small GTP-binding protein domain.
   
    0.499
Your Current Organism:
Natronobacterium gregoryi
NCBI taxonomy Id: 797304
Other names: N. gregoryi SP2, Natronobacterium gregoryi ATCC 43098, Natronobacterium gregoryi JCM 8860, Natronobacterium gregoryi NCIMB 2189, Natronobacterium gregoryi SP2, Natronobacterium gregoryi str. SP2, Natronobacterium gregoryi strain SP2
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