STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ73815.1PFAM: Deoxyribodipyrimidine photo-lyase-related protein. (510 aa)    
Predicted Functional Partners:
AFZ71285.1
PFAM: FAD binding domain of DNA photolyase; DNA photolyase.
 
   
 0.687
AFZ74449.1
Putative NAD/FAD-dependent oxidoreductase.
 
     0.590
AFZ73816.1
PFAM: Archease protein family (DUF101/UPF0211).
       0.488
AFZ72381.1
Ketosteroid isomerase-like protein.
     
 0.446
uvrC
Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
     
 0.415
AFZ72900.1
Conserved protein of DIM6/NTAB family; PFAM: Flavin reductase like domain.
 
     0.414
AFZ74806.1
Tryptophan-rich sensory protein; PFAM: TspO/MBR family.
 
     0.409
Your Current Organism:
Natronobacterium gregoryi
NCBI taxonomy Id: 797304
Other names: N. gregoryi SP2, Natronobacterium gregoryi ATCC 43098, Natronobacterium gregoryi JCM 8860, Natronobacterium gregoryi NCIMB 2189, Natronobacterium gregoryi SP2, Natronobacterium gregoryi str. SP2, Natronobacterium gregoryi strain SP2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.