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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ74033.1Nucleoside-diphosphate-sugar pyrophosphorylase family protein; PFAM: Nucleotidyl transferase. (327 aa)    
Predicted Functional Partners:
glmM
PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; TIGRFAM: phosphoglucosamine mutase.
 
 
 0.951
AFZ72033.1
PFAM: Eukaryotic translation initiation factor 2 alpha subunit; S1 RNA binding domain.
   
 0.785
AFZ72360.1
PFAM: Initiation factor 2 subunit family; TIGRFAM: ribose-1,5-bisphosphate isomerase, e2b2 family; eIF-2B alpha/beta/delta-related uncharacterized proteins; Belongs to the eIF-2B alpha/beta/delta subunits family.
   
 0.687
AFZ73464.1
Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family; PFAM: NUDIX domain; Initiation factor 2 subunit family; Belongs to the eIF-2B alpha/beta/delta subunits family.
   
 0.687
AFZ74744.1
Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family; PFAM: Initiation factor 2 subunit family; Belongs to the eIF-2B alpha/beta/delta subunits family.
   
 0.687
eif2g
Translation initiation factor 2 subunit gamma; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EIF2G subfamily.
    
 0.675
AFZ73993.1
GTPase; PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain.
    
 0.675
AFZ74035.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
 
 
 0.647
AFZ74112.1
Putative PLP-dependent enzyme possibly involved in cell wall biogenesis; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.616
AFZ74129.1
PFAM: NAD dependent epimerase/dehydratase family.
 
 
 0.615
Your Current Organism:
Natronobacterium gregoryi
NCBI taxonomy Id: 797304
Other names: N. gregoryi SP2, Natronobacterium gregoryi ATCC 43098, Natronobacterium gregoryi JCM 8860, Natronobacterium gregoryi NCIMB 2189, Natronobacterium gregoryi SP2, Natronobacterium gregoryi str. SP2, Natronobacterium gregoryi strain SP2
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