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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ74101.1Hypothetical protein. (434 aa)    
Predicted Functional Partners:
AFZ74770.1
ATP-dependent exonuclase V beta subunit, helicase and exonuclease domain-containing; PFAM: UvrD/REP helicase.
  
     0.730
AFZ71924.1
PFAM: Protein of unknown function (DUF3267).
  
     0.681
AFZ72230.1
Hypothetical protein; PFAM: FemAB family.
  
     0.678
AFZ74463.1
PAS domain S-box; PFAM: HTH DNA binding domain; PAS fold; TIGRFAM: PAS domain S-box.
  
     0.674
AFZ73620.1
PFAM: DNA methylase.
  
     0.665
AFZ71466.1
Hypothetical protein; PFAM: Domain of unknown function (DUF364).
  
     0.653
AFZ72746.1
Hypothetical protein.
  
     0.640
AFZ71542.1
PFAM: HTH DNA binding domain.
  
     0.620
AFZ72837.1
Hypothetical protein.
  
     0.617
AFZ74796.1
4-hydroxybenzoate polyprenyltransferase-like prenyltransferase; PFAM: UbiA prenyltransferase family.
  
     0.611
Your Current Organism:
Natronobacterium gregoryi
NCBI taxonomy Id: 797304
Other names: N. gregoryi SP2, Natronobacterium gregoryi ATCC 43098, Natronobacterium gregoryi JCM 8860, Natronobacterium gregoryi NCIMB 2189, Natronobacterium gregoryi SP2, Natronobacterium gregoryi str. SP2, Natronobacterium gregoryi strain SP2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.