STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ74134.1Hypothetical protein. (299 aa)    
Predicted Functional Partners:
AFZ74135.1
PFAM: Redoxin.
 
  
 0.909
AFZ74267.1
ABC-type transport system involved in cytochrome c biogenesis, permease component; PFAM: Cytochrome C assembly protein.
 
  
 0.719
AFZ74259.1
PFAM: Cytochrome C assembly protein; TIGRFAM: c-type cytochrome biogenesis protein CcmF.
 
   
 0.640
AFZ71688.1
Putative divalent heavy-metal cations transporter; PFAM: ZIP Zinc transporter.
  
    0.600
AFZ71402.1
Heme/copper-type cytochrome/quinol oxidase, subunit 1; PFAM: Cytochrome c oxidase subunit III; Cytochrome C and Quinol oxidase polypeptide I; Belongs to the heme-copper respiratory oxidase family.
      
 0.527
AFZ71358.1
Putative divalent heavy-metal cations transporter; PFAM: ZIP Zinc transporter.
   
    0.526
AFZ71444.1
Putative divalent heavy-metal cations transporter; PFAM: ZIP Zinc transporter.
   
    0.526
grxC
Glutaredoxin, GrxC family; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Glutaredoxin; TIGRFAM: thioredoxin-disulfide reductase; Glutaredoxin, GrxC family.
 
  
 0.489
AFZ73752.1
Site-specific recombinase, DNA invertase Pin; PFAM: Resolvase, N terminal domain.
   
    0.479
AFZ74623.1
Site-specific recombinase, DNA invertase Pin; PFAM: Resolvase, N terminal domain.
   
    0.479
Your Current Organism:
Natronobacterium gregoryi
NCBI taxonomy Id: 797304
Other names: N. gregoryi SP2, Natronobacterium gregoryi ATCC 43098, Natronobacterium gregoryi JCM 8860, Natronobacterium gregoryi NCIMB 2189, Natronobacterium gregoryi SP2, Natronobacterium gregoryi str. SP2, Natronobacterium gregoryi strain SP2
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