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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ74248.1Glycine/betaine ABC transporter substrate-binding protein; PFAM: Substrate binding domain of ABC-type glycine betaine transport system. (326 aa)    
Predicted Functional Partners:
AFZ74247.1
PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain.
  
  
 0.782
AFZ72658.1
ABC-type dipeptide transport system, periplasmic component; PFAM: TAT (twin-arginine translocation) pathway signal sequence; Bacterial extracellular solute-binding proteins, family 5 Middle; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence.
  
  
 0.475
AFZ72897.1
ABC-type dipeptide transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle.
  
  
 0.455
AFZ74359.1
ABC-type Mn2+/Zn2+ transport system, permease component; PFAM: ABC 3 transport family.
  
  
  0.433
AFZ74649.1
Hypothetical protein.
  
  
 0.430
rad25
DNA/RNA helicase, superfamily II; PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit.
  
  
 0.430
AFZ74249.1
PFAM: Aldo/keto reductase family.
  
    0.428
AFZ73936.1
TIGRFAM: phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein.
    
  0.420
AFZ74369.1
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component; PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; OsmC-like protein; Biotin-requiring enzyme.
  
    0.416
AFZ72436.1
PFAM: Pyridine nucleotide-disulphide oxidoreductase; NADH:flavin oxidoreductase / NADH oxidase family.
     
 0.410
Your Current Organism:
Natronobacterium gregoryi
NCBI taxonomy Id: 797304
Other names: N. gregoryi SP2, Natronobacterium gregoryi ATCC 43098, Natronobacterium gregoryi JCM 8860, Natronobacterium gregoryi NCIMB 2189, Natronobacterium gregoryi SP2, Natronobacterium gregoryi str. SP2, Natronobacterium gregoryi strain SP2
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