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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ74467.1SCO family protein; PFAM: SCO1/SenC. (261 aa)    
Predicted Functional Partners:
AFZ74465.1
PFAM: Cytochrome C biogenesis protein transmembrane region.
 
   
 0.897
AFZ71402.1
Heme/copper-type cytochrome/quinol oxidase, subunit 1; PFAM: Cytochrome c oxidase subunit III; Cytochrome C and Quinol oxidase polypeptide I; Belongs to the heme-copper respiratory oxidase family.
 
  
 0.892
AFZ74466.1
PFAM: Redoxin.
 
     0.862
AFZ73017.1
Heme/copper-type cytochrome/quinol oxidases, subunit 2; PFAM: Cytochrome C oxidase subunit II, periplasmic domain.
 
 
 0.822
AFZ71313.1
Heme/copper-type cytochrome/quinol oxidases, subunit 2; PFAM: Cytochrome C oxidase subunit II, periplasmic domain.
 
 
 0.814
coxB
PFAM: Cytochrome C oxidase subunit II, periplasmic domain; TIGRFAM: cytochrome c oxidase, subunit II.
 
 
 0.735
AFZ73018.1
Heme/copper-type cytochrome/quinol oxidase, subunit 1; PFAM: Cytochrome C and Quinol oxidase polypeptide I; Belongs to the heme-copper respiratory oxidase family.
 
  
 0.674
AFZ74478.1
PFAM: Thioredoxin.
 
 
 0.664
AFZ74403.1
Thioredoxin domain-containing protein; PFAM: Thioredoxin.
 
 
 0.564
AFZ74468.1
Hypothetical protein.
       0.511
Your Current Organism:
Natronobacterium gregoryi
NCBI taxonomy Id: 797304
Other names: N. gregoryi SP2, Natronobacterium gregoryi ATCC 43098, Natronobacterium gregoryi JCM 8860, Natronobacterium gregoryi NCIMB 2189, Natronobacterium gregoryi SP2, Natronobacterium gregoryi str. SP2, Natronobacterium gregoryi strain SP2
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