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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ74515.1PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, archaeal type. (384 aa)    
Predicted Functional Partners:
AFZ73147.1
PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, archaeal type.
  
  
 
0.907
AFZ72779.1
PFAM: Peptidase S24-like.
     
  0.900
AFZ72798.1
PFAM: Peptidase S24-like.
     
  0.900
AFZ73426.1
TIGRFAM: PGF-CTERM archaeal protein-sorting signal.
  
     0.698
AFZ71985.1
Hypothetical protein.
  
     0.695
AFZ71284.1
PFAM: PAP2 superfamily.
 
   
 0.617
AFZ74389.1
Hypothetical protein; PFAM: Cupin domain.
  
     0.604
AFZ71866.1
Membrane-associated phospholipid phosphatase; PFAM: PAP2 superfamily.
 
   
 0.591
AFZ72383.1
PFAM: DoxX.
  
    0.582
AFZ74416.1
Hypothetical protein.
 
    0.573
Your Current Organism:
Natronobacterium gregoryi
NCBI taxonomy Id: 797304
Other names: N. gregoryi SP2, Natronobacterium gregoryi ATCC 43098, Natronobacterium gregoryi JCM 8860, Natronobacterium gregoryi NCIMB 2189, Natronobacterium gregoryi SP2, Natronobacterium gregoryi str. SP2, Natronobacterium gregoryi strain SP2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.