STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ74733.1PFAM: Protein of unknown function (DUF555); Belongs to the UPF0212 family. (117 aa)    
Predicted Functional Partners:
cofC
2-phospho-L-lactate guanylyltransferase; Guanylyltransferase that catalyzes the activation of phosphoenolpyruvate (PEP) as enolpyruvoyl-2-diphospho-5'-guanosine, via the condensation of PEP with GTP. It is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor; Belongs to the CofC family.
  
     0.718
AFZ71599.1
Putative acyltransferase; PFAM: Bacterial transferase hexapeptide (three repeats); Protein of unknown function, DUF583.
  
     0.717
AFZ74732.1
PFAM: Protein of unknown function (DUF790).
 
     0.701
AFZ74820.1
PFAM: Uncharacterized protein conserved in archaea (DUF2150).
  
     0.699
AFZ71675.1
RecJ-like exonuclease with DnaJ-type Zn-finger domain; PFAM: DHH family; OB-fold nucleic acid binding domain.
  
     0.687
AFZ72801.1
PFAM: Uncharacterized protein conserved in archaea (DUF2073).
  
     0.676
AFZ72954.1
PFAM: Protein of unknown function (DUF460).
  
     0.648
AFZ71984.1
Putative transcriptional regulator; PFAM: Bacterial regulatory protein, arsR family; Sugar-specific transcriptional regulator TrmB.
  
     0.646
AFZ73091.1
PFAM: ATPase family associated with various cellular activities (AAA); Belongs to the AAA ATPase family.
  
     0.637
AFZ71581.1
PFAM: Dihydrouridine synthase (Dus); TIGRFAM: TIM-barrel protein, putative.
  
     0.636
Your Current Organism:
Natronobacterium gregoryi
NCBI taxonomy Id: 797304
Other names: N. gregoryi SP2, Natronobacterium gregoryi ATCC 43098, Natronobacterium gregoryi JCM 8860, Natronobacterium gregoryi NCIMB 2189, Natronobacterium gregoryi SP2, Natronobacterium gregoryi str. SP2, Natronobacterium gregoryi strain SP2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.