close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ74806.1Tryptophan-rich sensory protein; PFAM: TspO/MBR family. (163 aa)    
Predicted Functional Partners:
AFZ71285.1
PFAM: FAD binding domain of DNA photolyase; DNA photolyase.
 
  
 0.759
AFZ74807.1
PUA-domain protein; PFAM: PUA domain; TIGRFAM: arCOG04150 universal archaeal PUA-domain protein; uncharacterized domain 2.
       0.536
AFZ71380.1
PFAM: Magnesium chelatase, subunit ChlI; von Willebrand factor type A domain.
 
  
 0.485
AFZ73378.1
Phytoene desaturase; PFAM: Flavin containing amine oxidoreductase; TIGRFAM: phytoene desaturase.
 
  
 0.474
AFZ71497.1
Theronine dehydrogenase-like Zn-dependent dehydrogenase; TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
 
  
 0.422
AFZ73815.1
PFAM: Deoxyribodipyrimidine photo-lyase-related protein.
 
     0.409
AFZ73729.1
Short-chain dehydrogenase of unknown substrate specificity; PFAM: short chain dehydrogenase.
 
  
 0.403
AFZ73385.1
Phytoene/squalene synthetase; PFAM: Squalene/phytoene synthase.
 
  
 0.401
Your Current Organism:
Natronobacterium gregoryi
NCBI taxonomy Id: 797304
Other names: N. gregoryi SP2, Natronobacterium gregoryi ATCC 43098, Natronobacterium gregoryi JCM 8860, Natronobacterium gregoryi NCIMB 2189, Natronobacterium gregoryi SP2, Natronobacterium gregoryi str. SP2, Natronobacterium gregoryi strain SP2
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.