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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ74855.1Hypothetical protein; Manually curated. (249 aa)    
Predicted Functional Partners:
AFZ72009.1
Putative metal-dependent membrane protease; PFAM: CAAX amino terminal protease family.
  
     0.713
radB
RecA/RadA recombinase; Involved in DNA repair and in homologous recombination. May regulate the cleavage reactions of the branch-structured DNA. Has a very weak ATPase activity that is not stimulated by DNA. Binds DNA but does not promote DNA strands exchange.
       0.672
AFZ72152.1
Putative phosphohydrolase.
  
     0.543
AFZ72485.1
PFAM: EthD protein; TIGRFAM: conserved hypothetical protein.
  
     0.537
AFZ72477.1
Putative domain HDIG-containing protein; PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG.
  
     0.509
AFZ71728.1
PFAM: HTH DNA binding domain.
  
     0.495
AFZ73527.1
PFAM: Uncharacterised protein family (UPF0146); manually curated; Belongs to the UPF0146 family.
  
     0.466
AFZ72394.1
Hypothetical protein.
  
     0.464
AFZ72538.1
Hypothetical protein; PFAM: Domain of unknown function (DUF309).
  
     0.462
AFZ74442.1
Mn2+-dependent serine/threonine protein kinase; PFAM: RIO1 family.
  
     0.444
Your Current Organism:
Natronobacterium gregoryi
NCBI taxonomy Id: 797304
Other names: N. gregoryi SP2, Natronobacterium gregoryi ATCC 43098, Natronobacterium gregoryi JCM 8860, Natronobacterium gregoryi NCIMB 2189, Natronobacterium gregoryi SP2, Natronobacterium gregoryi str. SP2, Natronobacterium gregoryi strain SP2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.