| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EHM49703.1 | EHM49886.1 | HMPREF9080_03005 | HMPREF9080_02936 | Acetyltransferase, GNAT family; KEGG: ddd:Dda3937_02503 8.9e-33 ypfI; putative hydrolase. | tRNA nucleotidyltransferase; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.410 |
| EHM49703.1 | EHM53493.1 | HMPREF9080_03005 | HMPREF9080_01723 | Acetyltransferase, GNAT family; KEGG: ddd:Dda3937_02503 8.9e-33 ypfI; putative hydrolase. | Hypothetical protein. | 0.782 |
| EHM49703.1 | EHM56002.1 | HMPREF9080_03005 | HMPREF9080_00185 | Acetyltransferase, GNAT family; KEGG: ddd:Dda3937_02503 8.9e-33 ypfI; putative hydrolase. | Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.940 |
| EHM49703.1 | EHM56186.1 | HMPREF9080_03005 | HMPREF9080_00007 | Acetyltransferase, GNAT family; KEGG: ddd:Dda3937_02503 8.9e-33 ypfI; putative hydrolase. | KEGG: dno:DNO_1123 5.1e-70 rnd; ribonuclease D K03684; Psort location: Cytoplasmic, score: 9.97. | 0.760 |
| EHM49703.1 | rnr | HMPREF9080_03005 | HMPREF9080_01066 | Acetyltransferase, GNAT family; KEGG: ddd:Dda3937_02503 8.9e-33 ypfI; putative hydrolase. | Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.649 |
| EHM49703.1 | rpsD | HMPREF9080_03005 | HMPREF9080_00534 | Acetyltransferase, GNAT family; KEGG: ddd:Dda3937_02503 8.9e-33 ypfI; putative hydrolase. | Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.821 |
| EHM49703.1 | rpsK | HMPREF9080_03005 | HMPREF9080_00535 | Acetyltransferase, GNAT family; KEGG: ddd:Dda3937_02503 8.9e-33 ypfI; putative hydrolase. | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.795 |
| EHM49703.1 | rsmA | HMPREF9080_03005 | HMPREF9080_00919 | Acetyltransferase, GNAT family; KEGG: ddd:Dda3937_02503 8.9e-33 ypfI; putative hydrolase. | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.552 |
| EHM49886.1 | EHM49703.1 | HMPREF9080_02936 | HMPREF9080_03005 | tRNA nucleotidyltransferase; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | Acetyltransferase, GNAT family; KEGG: ddd:Dda3937_02503 8.9e-33 ypfI; putative hydrolase. | 0.410 |
| EHM49886.1 | EHM53493.1 | HMPREF9080_02936 | HMPREF9080_01723 | tRNA nucleotidyltransferase; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | Hypothetical protein. | 0.782 |
| EHM49886.1 | EHM56002.1 | HMPREF9080_02936 | HMPREF9080_00185 | tRNA nucleotidyltransferase; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.710 |
| EHM49886.1 | EHM56186.1 | HMPREF9080_02936 | HMPREF9080_00007 | tRNA nucleotidyltransferase; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | KEGG: dno:DNO_1123 5.1e-70 rnd; ribonuclease D K03684; Psort location: Cytoplasmic, score: 9.97. | 0.961 |
| EHM49886.1 | rnr | HMPREF9080_02936 | HMPREF9080_01066 | tRNA nucleotidyltransferase; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.986 |
| EHM49886.1 | rpsD | HMPREF9080_02936 | HMPREF9080_00534 | tRNA nucleotidyltransferase; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.854 |
| EHM49886.1 | rpsK | HMPREF9080_02936 | HMPREF9080_00535 | tRNA nucleotidyltransferase; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.821 |
| EHM49886.1 | rsmA | HMPREF9080_02936 | HMPREF9080_00919 | tRNA nucleotidyltransferase; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.527 |
| EHM53493.1 | EHM49703.1 | HMPREF9080_01723 | HMPREF9080_03005 | Hypothetical protein. | Acetyltransferase, GNAT family; KEGG: ddd:Dda3937_02503 8.9e-33 ypfI; putative hydrolase. | 0.782 |
| EHM53493.1 | EHM49886.1 | HMPREF9080_01723 | HMPREF9080_02936 | Hypothetical protein. | tRNA nucleotidyltransferase; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.782 |
| EHM53493.1 | EHM56002.1 | HMPREF9080_01723 | HMPREF9080_00185 | Hypothetical protein. | Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.723 |
| EHM53493.1 | EHM56186.1 | HMPREF9080_01723 | HMPREF9080_00007 | Hypothetical protein. | KEGG: dno:DNO_1123 5.1e-70 rnd; ribonuclease D K03684; Psort location: Cytoplasmic, score: 9.97. | 0.811 |
