Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EHM52332.1Toxin-antitoxin system, antitoxin component, AbrB family. (80 aa)    
Predicted Functional Partners:
vapC-2
PIN domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
 
 
 0.974
vapC-4
PIN domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
 
 
 0.872
EHM50271.1
Toxin-antitoxin system, toxin component, PIN domain protein; KEGG: vei:Veis_4712 4.5e-05 serine O-acetyltransferase K00640; Psort location: CytoplasmicMembrane, score: 9.82; overlaps another CDS with the same product name.
  
   0.807
EHM50272.1
Toxin-antitoxin system, toxin component, PIN domain protein; Overlaps another CDS with the same product name.
  
   0.784
EHM52330.1
Hypothetical protein.
       0.773
vapC-3
PIN domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
  
   0.729
EHM52333.1
Efflux transporter, outer membrane factor lipoprotein, NodT family; KEGG: ddd:Dda3937_01226 2.3e-26 outer membrane protein; Psort location: OuterMembrane, score: 9.93.
       0.709
EHM55634.1
Toxin-antitoxin system, toxin component, PIN domain protein.
  
   0.683
EHM52334.1
Putative macrolide export ATP-binding/permease protein MacB; KEGG: dno:DNO_0872 4.6e-179 macrolide-specific ABC-type efflux carrier protein; K05685 macrolide transport system ATP-binding/permease protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.656
EHM52335.1
Hypothetical protein; KEGG: aha:AHA_2990 2.2e-08 macrolide-specific ABC-type efflux carrier; K05685 macrolide transport system ATP-binding/permease protein.
       0.656
Your Current Organism:
Cardiobacterium valvarum
NCBI taxonomy Id: 797473
Other names: C. valvarum F0432, Cardiobacterium valvarum F0432, Cardiobacterium valvarum str. F0432, Cardiobacterium valvarum strain F0432
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