STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM52333.1Efflux transporter, outer membrane factor lipoprotein, NodT family; KEGG: ddd:Dda3937_01226 2.3e-26 outer membrane protein; Psort location: OuterMembrane, score: 9.93. (468 aa)    
Predicted Functional Partners:
EHM52334.1
Putative macrolide export ATP-binding/permease protein MacB; KEGG: dno:DNO_0872 4.6e-179 macrolide-specific ABC-type efflux carrier protein; K05685 macrolide transport system ATP-binding/permease protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.984
EHM52335.1
Hypothetical protein; KEGG: aha:AHA_2990 2.2e-08 macrolide-specific ABC-type efflux carrier; K05685 macrolide transport system ATP-binding/permease protein.
 
 
 0.975
EHM52336.1
Efflux transporter, RND family, MFP subunit; KEGG: rcp:RCAP_rcc02894 1.6e-09 mdtE; multidrug resistance protein MdtE K03585; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.969
EHM52407.1
KEGG: rcp:RCAP_rcc02894 2.0e-43 mdtE; multidrug resistance protein MdtE K03585; Psort location: CytoplasmicMembrane, score: 9.97; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.932
EHM52406.1
Putative inner membrane multidrug efflux protein BpeB; KEGG: rcp:RCAP_rcc02895 2.7e-231 mdtF; multidrug resistance protein MdtF; Psort location: CytoplasmicMembrane, score: 10.00.
 
  0.845
EHM52512.1
Efflux transporter, RND family, MFP subunit; KEGG: rcp:RCAP_rcc02894 1.6e-27 mdtE; multidrug resistance protein MdtE K03585; Psort location: CytoplasmicMembrane, score: 9.82; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.797
EHM49697.1
Efflux transporter, RND family, MFP subunit; KEGG: rcp:RCAP_rcc02894 6.6e-29 mdtE; multidrug resistance protein MdtE K03585; Psort location: CytoplasmicMembrane, score: 9.97; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.791
EHM55959.1
Auxiliary transport protein, membrane fusion protein family protein; KEGG: apb:SAR116_2008 3.2e-11 secretion protein HlyD; Psort location: CytoplasmicMembrane, score: 9.82.
 
 0.726
EHM52330.1
Hypothetical protein.
       0.709
vapC-2
PIN domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
       0.709
Your Current Organism:
Cardiobacterium valvarum
NCBI taxonomy Id: 797473
Other names: C. valvarum F0432, Cardiobacterium valvarum F0432, Cardiobacterium valvarum str. F0432, Cardiobacterium valvarum strain F0432
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