Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
EHM52212.1KEGG: noc:Noc_2644 2.1e-29 ABC transporter, ATPase subunit K01990; Psort location: CytoplasmicMembrane, score: 10.00. (526 aa)    
Predicted Functional Partners:
EHM52211.1
Putative protease SohB; KEGG: dno:DNO_0048 1.0e-94 putative periplasmic protease; K04774 serine protease SohB; Psort location: CytoplasmicMembrane, score: 7.88.
       0.783
EHM52284.1
Putative membrane protein NosY; KEGG: sde:Sde_3669 0.0048 sensory transduction protein kinase AlgZ K08082; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.755
EHM52210.1
Xaa-His dipeptidase; KEGG: dno:DNO_0013 2.8e-108 aminoacyl-histidine dipeptidase; K01270 aminoacylhistidine dipeptidase; Psort location: Cytoplasmic, score: 8.96.
       0.681
msbA
Lipid A export permease/ATP-binding protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
  
 0.677
EHM55563.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.86.
 
  
 0.623
atpC
ATP synthase F1, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
   0.613
rpmG
Ribosomal protein L33; KEGG: apb:SAR116_0619 8.5e-13 ribosomal protein L33 K02913; Psort location: Cytoplasmic, score: 9.26; Belongs to the bacterial ribosomal protein bL33 family.
       0.588
rpmB
Ribosomal protein L28; KEGG: apb:SAR116_1905 5.2e-13 LSU ribosomal protein L28P K02902; Psort location: Cytoplasmic, score: 9.26; Belongs to the bacterial ribosomal protein bL28 family.
       0.580
rpsK
30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.
  
     0.506
EHM52461.1
KEGG: sbn:Sbal195_1096 3.0e-33 sulfate ABC transporter, ATPase subunit; K02045 sulfate transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.494
Your Current Organism:
Cardiobacterium valvarum
NCBI taxonomy Id: 797473
Other names: C. valvarum F0432, Cardiobacterium valvarum F0432, Cardiobacterium valvarum str. F0432, Cardiobacterium valvarum strain F0432
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