STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM52178.1KEGG: cch:Cag_1938 3.6e-30 Sel1 repeat-containing protein K07126; Psort location: Extracellular, score: 9.71. (191 aa)    
Predicted Functional Partners:
EHM53769.1
Sel1 repeat protein; KEGG: mct:MCR_0405 9.5e-15 tetratricopeptide repeat family protein K07126.
  
     0.761
EHM52177.1
Hypothetical protein.
       0.510
EHM55753.1
Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
    
  0.483
EHM53285.1
KEGG: cch:Cag_1938 8.8e-09 Sel1 repeat-containing protein K07126.
  
     0.463
Your Current Organism:
Cardiobacterium valvarum
NCBI taxonomy Id: 797473
Other names: C. valvarum F0432, Cardiobacterium valvarum F0432, Cardiobacterium valvarum str. F0432, Cardiobacterium valvarum strain F0432
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.