Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EHM52182.1MATE efflux family protein; KEGG: rcp:RCAP_rcc02680 1.3e-57 mdtK; multidrug resistance protein MdtK K03327; Psort location: CytoplasmicMembrane, score: 10.00. (441 aa)    
Predicted Functional Partners:
EHM52180.1
Hypothetical protein.
       0.566
rplO
Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.
    
   0.505
EHM52459.1
Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: nmn:NMCC_2119 1.1e-145 gapA2; glyceraldehyde 3-phosphate dehydrogenase C; K00134 glyceraldehyde 3-phosphate dehydrogenase; Psort location: Cytoplasmic, score: 9.97; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
   
    0.500
EHM56002.1
Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.
   
    0.497
EHM52181.1
Hypothetical protein.
       0.430
EHM56005.1
Cation diffusion facilitator family transporter; KEGG: msi:Msm_0789 8.4e-22 cation efflux system protein (zinc/cadmium/cobalt); Psort location: CytoplasmicMembrane, score: 10.00.
  
   
 0.413
EHM54675.1
Type I secretion outer membrane protein, TolC family; Psort location: OuterMembrane, score: 10.00.
      
 0.406
EHM52179.1
Hypothetical protein.
       0.403
Your Current Organism:
Cardiobacterium valvarum
NCBI taxonomy Id: 797473
Other names: C. valvarum F0432, Cardiobacterium valvarum F0432, Cardiobacterium valvarum str. F0432, Cardiobacterium valvarum strain F0432
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