STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM01616.1KEGG: bmd:BMD_2658 8.5e-29 carbon-nitrogen family hydrolase; Psort location: Cytoplasmic, score: 9.26. (225 aa)    
Predicted Functional Partners:
EHL99763.1
Putative glutamate synthase [NADPH], large subunit; KEGG: lca:LSEI_2556 0. glutamate synthase domain-containing 3; K00265 glutamate synthase (NADPH/NADH) large chain; Psort location: Cytoplasmic, score: 9.26.
    
 0.913
EHL98435.1
Aldehyde-alcohol dehydrogenase 2; KEGG: lfe:LAF_0277 0. bifunctional acetaldehyde-CoA/alcohol dehydrogenase; K04072 acetaldehyde dehydrogenase / alcohol dehydrogenase; Psort location: Cytoplasmic, score: 9.26; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
   
 0.869
EHM01615.1
Hypothetical protein; KEGG: dat:HRM2_37420 0.00056 nadE; NadE K01950.
       0.664
EHM00020.1
KEGG: sga:GALLO_1481 1.4e-10 putative chorismate mutase; K04516 chorismate mutase; Psort location: Cytoplasmic, score: 8.96.
 
 
  0.574
birA
biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
    
 0.570
EHM00072.1
Putative 4-aminobutyrate transaminase; KEGG: clj:CLJU_c20470 1.3e-142 gabT; 4-aminobutyrate aminotransferase K07250; Psort location: Cytoplasmic, score: 9.97; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 
 0.553
EHL97102.1
Hydrolase, carbon-nitrogen family; KEGG: bce:BC4034 1.3e-57 nitrilase K08590; Psort location: Cytoplasmic, score: 9.26.
  
  
 
0.551
EHM00028.1
Transporter, major facilitator family protein; KEGG: rcu:RCOM_2110210 1.6e-08 Multidrug resistance protein mdtM, putative; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
  0.517
adk
Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.
    
  0.505
EHL99764.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: lcz:LCAZH_2518 3.8e-232 NADPH-dependent glutamate synthase beta chain-like oxidoreductase; K00266 glutamate synthase (NADPH/NADH) small chain; Psort location: Cytoplasmic, score: 9.97.
  
 0.501
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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