STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM01636.1KEGG: dtu:Dtur_1736 2.8e-30 transcriptional regulator, LacI family K02529; Psort location: Cytoplasmic, score: 9.97. (331 aa)    
Predicted Functional Partners:
EHM01634.1
Orotidine 5'-phosphate decarboxylase/HUMPS family protein; KEGG: lbr:LVIS_0442 1.0e-64 3-hexulose-6-phosphate synthase related protein; K08093 3-hexulose-6-phosphate synthase; Psort location: Cytoplasmic, score: 8.96.
 
     0.841
EHM01631.1
AP endonuclease, family 2; KEGG: hse:Hsero_1499 1.8e-26 sugar phosphate isomerase/epimerase; Psort location: Cytoplasmic, score: 9.97.
 
    0.836
EHM01632.1
Citrate transporter; KEGG: cdi:DIP1584 0.0010 putative lipoprotein signal peptidase; K03101 signal peptidase II; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.831
EHM01633.1
KEGG: lbr:LVIS_0441 2.7e-110 2-dehydro-3-deoxygluconokinase; K00874 2-dehydro-3-deoxygluconokinase; Psort location: Cytoplasmic, score: 9.97.
 
 
  0.824
EHM01635.1
6-phospho 3-hexuloisomerase; KEGG: lbr:LVIS_0443 2.1e-71 sugar phosphate isomerase; K08094 6-phospho-3-hexuloisomerase.
 
     0.806
EHL99763.1
Putative glutamate synthase [NADPH], large subunit; KEGG: lca:LSEI_2556 0. glutamate synthase domain-containing 3; K00265 glutamate synthase (NADPH/NADH) large chain; Psort location: Cytoplasmic, score: 9.26.
    
 
 0.790
EHL98463.1
Sugar-binding domain protein; KEGG: rmr:Rmar_2788 1.5e-29 transcriptional regulator, LacI family; Psort location: Cytoplasmic, score: 9.26.
  
     0.768
EHM00108.1
Hypothetical protein; KEGG: cbe:Cbei_0731 9.3e-14 alanine racemase K02529; Psort location: Cytoplasmic, score: 9.97.
  
     0.709
EHM00446.1
KEGG: hor:Hore_13150 1.1e-28 transcriptional regulator, LacI family K02529; Psort location: Cytoplasmic, score: 9.97.
  
     0.702
EHL98519.1
KEGG: hor:Hore_00410 3.7e-28 transcriptional regulator, LacI family; Psort location: Cytoplasmic, score: 9.97.
  
     0.698
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.