STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM01441.1Iojap-like protein; KEGG: mul:MUL_3692 5.0e-05 nadD; bifunctional nicotinate-nucleotide adenylyltransferase NadD/hypothetical protein; K00969 nicotinate-nucleotide adenylyltransferase. (79 aa)    
Predicted Functional Partners:
EHM01445.1
Ribosome biogenesis GTPase YqeH; KEGG: lre:Lreu_1237 3.7e-138 GTP-binding protein YqeH K06948; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.958
EHM01442.1
Hydrolase, HD family; KEGG: clo:HMPREF0868_0799 1.6e-18 nadD; nicotinate-nucleotide adenylyltransferase K00969; Psort location: Cytoplasmic, score: 8.96.
 
    0.946
nadD
Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
  
  
 0.921
rplT
Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
   
 
 0.907
rpmI
Ribosomal protein L35; Psort location: Cytoplasmic, score: 9.26; Belongs to the bacterial ribosomal protein bL35 family.
   
 
 0.886
EHL95604.1
Competence/damage-inducible protein CinA domain protein; Belongs to the CinA family.
    
 0.872
EHM01444.1
RNA-binding protein, YhbY family.
  
  
 0.862
EHM01440.1
Hypothetical protein; KEGG: apb:SAR116_1850 0.00020 iojap-related protein K09710.
 
     0.827
EHL95908.1
Ribosome biogenesis GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
  
 
 0.825
rplN
Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
    
 
 0.824
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.