STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM01466.1Protein hit; KEGG: lsl:LSL_0477 3.4e-48 bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) K02503; Psort location: Cytoplasmic, score: 9.26. (144 aa)    
Predicted Functional Partners:
EHM01467.1
Hypothetical protein.
       0.773
EHM01464.1
Bacterial ABC transporter protein EcsB; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.697
trmB
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
       0.655
EHM01465.1
ABC transporter, ATP-binding protein EcsA; KEGG: snc:HMPREF0837_10816 9.7e-76 skfE; putative sulfate-transporting ATPase; Psort location: Cytoplasmic, score: 9.12.
       0.655
prsA
Putative foldase protein PrsA; Plays a major role in protein secretion by helping the post- translocational extracellular folding of several secreted proteins.
  
   0.604
EHL98518.1
Putative phosphoglucomutase; KEGG: lbr:LVIS_1907 3.1e-205 phosphomannomutase; K01835 phosphoglucomutase; Psort location: Cytoplasmic, score: 9.97.
  
   0.578
EHM01461.1
Thioredoxin; KEGG: edi:EDI_037950 1.2e-11 thioredoxin-1.
   
  0.571
EHM00743.1
KEGG: lbr:LVIS_1439 9.7e-60 NUDIX family hydrolase; K01515 ADP-ribose pyrophosphatase.
  
 0.567
EHL97518.1
Hydrolase, NUDIX family; KEGG: lpj:JDM1_2216 6.0e-44 ADP-ribose pyrophosphatase; K01515 ADP-ribose pyrophosphatase; Psort location: Cytoplasmic, score: 9.97; Belongs to the Nudix hydrolase family.
  
 0.565
EHL98217.1
Hypothetical protein.
   
  0.559
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.