STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM01472.1Hypothetical protein; KEGG: bal:BACI_c10480 7.9e-21 malate synthase; Psort location: CytoplasmicMembrane, score: 9.82. (858 aa)    
Predicted Functional Partners:
EHM01473.1
Ser/Thr phosphatase family protein; KEGG: sax:USA300HOU_1836 5.9e-53 sbcD; DNA repair exonuclease; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.972
EHM01471.1
Nucleic acid-binding domain protein; KEGG: sjj:SPJ_1972 3.6e-85 3'-5' exoribonuclease YhaM K03698; Psort location: Cytoplasmic, score: 8.96.
  
    0.826
EHM01474.1
Hypothetical protein; Belongs to the UPF0342 family.
 
     0.751
EHM00489.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.694
EHM01475.1
Penicillin-binding protein, 1A family; KEGG: lbr:LVIS_1489 1.0e-215 membrane carboxypeptidase (penicillin-binding protein); K12555 penicillin-binding protein 2A; Psort location: CytoplasmicMembrane, score: 9.82.
 
     0.642
EHM01476.1
Hypothetical protein; KEGG: lbr:LVIS_1489 2.1e-26 membrane carboxypeptidase (penicillin-binding protein); K12555 penicillin-binding protein 2A.
 
     0.583
EHL95798.1
Ser/Thr phosphatase family protein; KEGG: ldb:Ldb1591 1.1e-108 putative 5'-nucleotidase K01081; Belongs to the 5'-nucleotidase family.
  
     0.583
EHL97126.1
Hypothetical protein; KEGG: lsl:LSL_0044 0.0012 oxidoreductase K00100.
  
     0.507
EHM01452.1
Replication initiation and membrane attachment protein, DnaB/DnaD family; KEGG: bpu:BPUM_2543 1.2e-31 dnaB; replicative DNA helicase K03346; Psort location: Cytoplasmic, score: 8.96.
  
     0.482
EHM00958.1
KEGG: sds:SDEG_1039 6.7e-36 lipoate-protein ligase A.
  
     0.481
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.