STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM01483.1Hypothetical protein. (81 aa)    
Predicted Functional Partners:
EHL98372.1
Hypothetical protein.
  
     0.618
EHL98774.1
Hypothetical protein.
  
     0.617
EHL98625.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.601
EHL95199.1
DNA-binding helix-turn-helix protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.599
EHM01100.1
Transporter, major facilitator family protein; KEGG: apb:SAR116_1122 4.3e-25 tetracycline resistance protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.574
EHL98450.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.548
EHM01140.1
Hypothetical protein; KEGG: lbr:LVIS_0183 1.7e-09 xylose isomerase K01805.
  
     0.536
EHM00715.1
Hypothetical protein.
  
     0.526
EHL98781.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.520
EHL95138.1
DNA-binding helix-turn-helix protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.518
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.