STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM01485.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (232 aa)    
Predicted Functional Partners:
EHL97383.1
KEGG: lsl:LSL_0916 8.5e-45 hsdS; type I restriction-modification system specificity subunit; K01154 type I restriction enzyme, S subunit.
  
    0.764
EHL97375.1
Hypothetical protein.
  
    0.731
EHM01484.1
Putative organic hydroperoxide resistance transcriptional regulator; KEGG: dsh:Dshi_0779 3.5e-06 transcriptional regulator; Psort location: Cytoplasmic, score: 9.97.
    
  0.629
EHL97537.1
Hypothetical protein; KEGG: amt:Amet_1608 8.0e-17 restriction modification system DNA specificity subunit; K01154 type I restriction enzyme, S subunit.
  
    0.559
EHL97538.1
Hypothetical protein; KEGG: amt:Amet_1608 2.5e-38 restriction modification system DNA specificity subunit; K01154 type I restriction enzyme, S subunit.
  
    0.559
EHL99049.1
Acyltransferase; KEGG: lsl:LSL_1527 5.1e-13 O-acetyl transferase K00680; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.500
EHL98611.1
Hypothetical protein; KEGG: pyo:PY00139 0.0060 erythrocyte membrane protein; K09561 STIP1 homology and U-box containing protein 1.
  
     0.480
EHM01127.1
NAD dependent epimerase/dehydratase family protein; KEGG: lsl:LSL_0044 1.6e-27 oxidoreductase K00100.
   
    0.479
EHL97075.1
Hypothetical protein; KEGG: bsu:BSU36620 2.7e-25 ywnB; putative oxidoreductase K07118; Psort location: Cytoplasmic, score: 8.96.
   
    0.479
EHL95355.1
Hypothetical protein; KEGG: lsl:LSL_0044 7.8e-42 oxidoreductase K00100; Psort location: Cytoplasmic, score: 8.96.
   
    0.479
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.