STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM01490.1Hypothetical protein. (170 aa)    
Predicted Functional Partners:
EHM01489.1
KEGG: llk:LLKF_0213 1.9e-16 yccB; family 25 glycosyl hydrolase.
       0.773
EHM01491.1
Hypothetical protein.
       0.773
EHM01492.1
Hypothetical protein; KEGG: sso:SSO0561 0.0070 atpE; ATP synthase subunit E (AtpE); K02121 V-type H+-transporting ATPase subunit E; Psort location: Cytoplasmic, score: 8.96.
       0.752
EHM01487.1
DNA-binding helix-turn-helix protein; KEGG: mla:Mlab_1603 2.9e-18 adenine deaminase K01486; Psort location: Cytoplasmic, score: 8.96.
       0.556
EHM01488.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.556
EHM01493.1
Hypothetical protein; Psort location: Extracellular, score: 9.64.
       0.414
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.