STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM01277.1Hypothetical protein. (81 aa)    
Predicted Functional Partners:
EHM01276.1
Peptidase, M23 family; KEGG: bsu:BSU21350 4.9e-07 yomI; SPbeta phage protein; lytic transglycosylase.
      0.963
EHL96545.1
Phage tail tape measure protein, TP901 family; KEGG: bsu:BSU21350 0.0064 yomI; SPbeta phage protein; lytic transglycosylase; Psort location: OuterMembrane, score: 9.49.
 
      0.842
EHM01278.1
Hypothetical protein; KEGG: lsg:lse_0124 0.0084 5'-nucleotidase, putative; Psort location: Extracellular, score: 9.64.
       0.773
EHM01279.1
Hypothetical protein; KEGG: lca:LSEI_2573 0.00067 DNA-directed RNA polymerase subunit delta; K03048 DNA-directed RNA polymerase subunit delta; Psort location: Cytoplasmic, score: 8.96.
       0.586
EHM01280.1
Hypothetical protein.
       0.586
EHM01281.1
Hypothetical protein.
       0.586
EHM01282.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.578
EHM01283.1
Hypothetical protein.
       0.578
EHM01284.1
Hypothetical protein.
       0.578
EHM01285.1
Hypothetical protein; Psort location: Extracellular, score: 9.64.
       0.578
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.