STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM01174.1Alpha-galactosidase; KEGG: cbe:Cbei_4441 4.0e-141 glycoside hydrolase, clan GH-D; K07407 alpha-galactosidase; Psort location: Cytoplasmic, score: 8.96. (515 aa)    
Predicted Functional Partners:
EHM01173.1
Hypothetical protein; KEGG: cbe:Cbei_4441 2.4e-33 glycoside hydrolase, clan GH-D; K07407 alpha-galactosidase.
     0.993
EHM01179.1
Hypothetical protein; KEGG: bde:BDP_2092 7.4e-85 alpha-galactosidase.
 
  
  0.877
EHM01175.1
Hypothetical protein.
 
     0.864
EHL96834.1
KEGG: ppe:PEPE_0204 3.8e-113 beta-galactosidase; K01190 beta-galactosidase.
  
 
 0.852
EHL98503.1
Aldose 1-epimerase; Catalyzes the interconversion of alpha and beta anomers of maltose.
  
 
  0.851
EHM01176.1
KEGG: sdn:Sden_2531 0.00027 Ada, metal-binding; K13529 AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II.
 
     0.814
EHL99000.1
Transporter, major facilitator family protein; KEGG: xau:Xaut_0826 6.8e-05 sugar transporter; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.642
EHL95230.1
Transporter, major facilitator family protein; KEGG: rcu:RCOM_0937520 0.0031 sugar transporter, putative; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.552
EHM00106.1
Alpha amylase, catalytic domain protein; KEGG: lbr:LVIS_0309 4.4e-151 trehalose-6-phosphate hydrolase; K01187 alpha-glucosidase; Psort location: Cytoplasmic, score: 9.26.
  
 
 0.536
EHL98475.1
Oligo-1,6-glucosidase; KEGG: lbr:LVIS_2180 1.8e-239 trehalose-6-phosphate hydrolase; K01187 alpha-glucosidase; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.536
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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