STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM01179.1Hypothetical protein; KEGG: bde:BDP_2092 7.4e-85 alpha-galactosidase. (431 aa)    
Predicted Functional Partners:
EHL96834.1
KEGG: ppe:PEPE_0204 3.8e-113 beta-galactosidase; K01190 beta-galactosidase.
 
  
  0.899
EHL96836.1
Glycosyl hydrolase family 2, sugar binding domain protein; KEGG: lpl:lp_3483 1.1e-92 lacL; beta-galactosidase, large subunit K01190; Psort location: Cytoplasmic, score: 8.96; Belongs to the glycosyl hydrolase 2 family.
 
  
  0.892
EHL96835.1
Glycosyl hydrolase family 2, TIM barrel domain protein; KEGG: lac:LBA1467 1.7e-135 lacL; beta-galactosidase large subunit (lactase) K01190; Psort location: Cytoplasmic, score: 8.96.
 
  
  0.890
EHM01173.1
Hypothetical protein; KEGG: cbe:Cbei_4441 2.4e-33 glycoside hydrolase, clan GH-D; K07407 alpha-galactosidase.
 
  
  0.889
EHL98503.1
Aldose 1-epimerase; Catalyzes the interconversion of alpha and beta anomers of maltose.
   
 
  0.880
EHM01174.1
Alpha-galactosidase; KEGG: cbe:Cbei_4441 4.0e-141 glycoside hydrolase, clan GH-D; K07407 alpha-galactosidase; Psort location: Cytoplasmic, score: 8.96.
 
  
  0.877
EHL98638.1
Glycosyl hydrolase family 2, sugar binding domain protein; KEGG: lrh:LGG_00050 1.6e-146 uidA; beta-glucuronidase (GH2); K01195 beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
 
  
  0.866
EHM01132.1
Alpha-galactosidase; KEGG: lbr:LVIS_1758 1.1e-278 alpha-galactosidase; K07407 alpha-galactosidase; Psort location: Extracellular, score: 9.64.
    
  0.834
EHM01133.1
Hypothetical protein; KEGG: lbr:LVIS_1758 3.5e-24 alpha-galactosidase; K07407 alpha-galactosidase.
    
  0.834
EHL98462.1
Alpha-galactosidase; KEGG: llk:LLKF_2267 1.4e-209 aga; alpha-galactosidase K07407.
    
  0.834
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.