STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM01080.1Transcriptional regulator, TetR family; Psort location: Cytoplasmic, score: 8.96. (234 aa)    
Predicted Functional Partners:
EHM01081.1
Hypothetical protein; KEGG: smc:SmuNN2025_0104 0.0054 putative PTS system fructose-specific IIBC component; K02769 PTS system, fructose-specific IIB component K02770; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.947
EHM01082.1
KEGG: llk:LLKF_0994 1.1e-81 yjjC; ABC transporter ATP-binding protein K09687; Psort location: CytoplasmicMembrane, score: 9.82.
 
     0.935
EHL97420.1
Transcriptional regulator, TetR family.
  
     0.562
EHM01079.1
Hypothetical protein; KEGG: cyp:PCC8801_3448 0.0032 N-acylneuraminate-9-phosphate synthase K01654; Psort location: Cytoplasmic, score: 8.96.
       0.468
EHM01085.1
Transcriptional regulator, MarR family.
 
     0.449
EHM01086.1
Flavodoxin-like protein; KEGG: lci:LCK_00777 2.2e-53 putative NADPH-quinone reductase (modulator of drug activity B).
 
     0.434
EHL98023.1
Ferritin-like protein; KEGG: sph:MGAS10270_Spy1275 1.4e-28 dpr; non-specific DNA-binding protein Dps / iron-binding ferritin-like antioxidant protein / ferroxidase K04047; Psort location: Cytoplasmic, score: 9.26; Belongs to the Dps family.
  
 
   0.419
EHL96850.1
Transcriptional regulator, TetR family.
  
     0.416
EHM01083.1
Organophosphate reductase domain protein; KEGG: lre:Lreu_0942 5.5e-25 2,5-didehydrogluconate reductase; Psort location: Cytoplasmic, score: 9.26.
       0.414
EHM01084.1
Glyoxal reductase domain protein; KEGG: lre:Lreu_0942 1.5e-38 2,5-didehydrogluconate reductase; Psort location: Cytoplasmic, score: 9.97.
       0.414
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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