STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM01094.1Histidine kinase; KEGG: lcb:LCABL_14440 1.2e-61 hpk6; histidine protein kinase; sensor protein K07778; Psort location: CytoplasmicMembrane, score: 9.82. (256 aa)    
Predicted Functional Partners:
EHM01095.1
Response regulator receiver domain protein; KEGG: fal:FRAAL4813 1.5e-38 putative two-component system response regulator K07693; Psort location: Cytoplasmic, score: 9.26.
 
 0.999
EHL95142.1
Putative oxygen regulatory protein NreC; KEGG: ava:Ava_2028 3.2e-29 two component LuxR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97.
 
 0.969
EHL96715.1
KEGG: bur:Bcep18194_B2520 2.7e-23 two component LuxR family transcriptional regulator K05971; Psort location: Cytoplasmic, score: 9.97.
 
 0.968
EHM01093.1
ABC-2 type transporter; KEGG: lpj:JDM1_1639 6.2e-08 hpk6; histidine protein kinase; sensor protein; K07778 two-component system, NarL family, sensor histidine kinase DesK; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.915
EHM01092.1
Hypothetical protein; KEGG: pmf:P9303_06461 9.3e-11 ccmA; putative multidrug efflux ABC transporter K09687.
 
  
 0.808
EHM00625.1
PspC domain protein; KEGG: bla:BLA_0408 0.0017 possible histidine kinase sensor of two component system; Psort location: CytoplasmicMembrane, score: 9.82.
  
  
 0.726
EHM01091.1
Hypothetical protein; KEGG: dvm:DvMF_0118 1.1e-14 ABC transporter related; K09817 zinc transport system ATP-binding protein.
 
  
 0.640
EHL95794.1
PspC domain protein; KEGG: bla:BLA_0408 0.0035 possible histidine kinase sensor of two component system; Psort location: CytoplasmicMembrane, score: 9.82.
  
  
 0.634
EHL95143.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: lpl:lp_1488 3.1e-127 hpk4; histidine protein kinase; sensor protein (putative) K07683; Psort location: CytoplasmicMembrane, score: 7.88.
  
0.603
EHM01475.1
Penicillin-binding protein, 1A family; KEGG: lbr:LVIS_1489 1.0e-215 membrane carboxypeptidase (penicillin-binding protein); K12555 penicillin-binding protein 2A; Psort location: CytoplasmicMembrane, score: 9.82.
   
  
 0.489
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.