STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM01095.1Response regulator receiver domain protein; KEGG: fal:FRAAL4813 1.5e-38 putative two-component system response regulator K07693; Psort location: Cytoplasmic, score: 9.26. (202 aa)    
Predicted Functional Partners:
EHM01094.1
Histidine kinase; KEGG: lcb:LCABL_14440 1.2e-61 hpk6; histidine protein kinase; sensor protein K07778; Psort location: CytoplasmicMembrane, score: 9.82.
 
 0.999
EHM01093.1
ABC-2 type transporter; KEGG: lpj:JDM1_1639 6.2e-08 hpk6; histidine protein kinase; sensor protein; K07778 two-component system, NarL family, sensor histidine kinase DesK; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.906
EHL95143.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: lpl:lp_1488 3.1e-127 hpk4; histidine protein kinase; sensor protein (putative) K07683; Psort location: CytoplasmicMembrane, score: 7.88.
 
 0.903
EHM01092.1
Hypothetical protein; KEGG: pmf:P9303_06461 9.3e-11 ccmA; putative multidrug efflux ABC transporter K09687.
 
   
 0.765
EHM00722.1
Tetratricopeptide repeat protein.
    
 0.709
EHM01091.1
Hypothetical protein; KEGG: dvm:DvMF_0118 1.1e-14 ABC transporter related; K09817 zinc transport system ATP-binding protein.
 
   
 0.618
EHM00357.1
Hypothetical protein.
    
 0.528
EHL99021.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: lcb:LCABL_07770 3.8e-97 ciaH; sensor protein; Psort location: CytoplasmicMembrane, score: 10.00.
   
 0.505
EHL98930.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: lca:LSEI_2680 2.2e-69 signal transduction histidine kinase; K00936; Psort location: CytoplasmicMembrane, score: 10.00.
   
 0.505
EHL98454.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: lcb:LCABL_07770 1.1e-83 ciaH; sensor protein; Psort location: CytoplasmicMembrane, score: 10.00.
   
 0.505
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.