STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM01110.1KEGG: lif:LinJ35.4840 3.8e-10 glycine cleavage system H protein K02437; Psort location: Cytoplasmic, score: 8.96. (105 aa)    
Predicted Functional Partners:
EHL99763.1
Putative glutamate synthase [NADPH], large subunit; KEGG: lca:LSEI_2556 0. glutamate synthase domain-containing 3; K00265 glutamate synthase (NADPH/NADH) large chain; Psort location: Cytoplasmic, score: 9.26.
     
 0.929
glyA
Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
  
 
 0.929
EHL95647.1
Glycine cleavage system H family protein.
  
  
 
0.918
EHL95120.1
KEGG: lbz:LbrM34_V2.4690 1.3e-09 glycine cleavage system H protein K02437; Psort location: Cytoplasmic, score: 8.96.
  
  
 
0.900
EHL98524.1
Hypothetical protein; KEGG: ngo:NGO1404 3.1e-08 glycine cleavage system protein H K02437.
  
  
 
0.869
EHM01109.1
KEGG: lwe:lwe0911 1.4e-60 lipoyltransferase and lipoate-protein ligase family protein K03800; Psort location: Cytoplasmic, score: 9.26.
   
  0.857
purQ
Phosphoribosylformylglycinamidine synthase I; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist i [...]
  
 
  0.852
EHL99641.1
KEGG: lbr:LVIS_0990 9.6e-211 glutamine synthetase; K01915 glutamine synthetase; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.851
EHL98042.1
Glu/Leu/Phe/Val dehydrogenase, dimerization domain protein; KEGG: lpj:JDM1_1013 2.7e-71 gdh; glutamate dehydrogenase; K00262 glutamate dehydrogenase (NADP+).
   
 
  0.847
EHL98043.1
NAD(P)-specific glutamate dehydrogenase domain protein; KEGG: lpl:lp_1169 2.6e-89 gdh; glutamate dehydrogenase K00262; Psort location: OuterMembrane, score: 9.92; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
  0.847
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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