STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM01114.1N-carbamoylputrescine amidase; KEGG: hmo:HM1_2343 2.4e-95 hydrolase, carbon-nitrogen family, putative; K12251 N-carbamoylputrescine amidase; Psort location: Cytoplasmic, score: 9.97. (286 aa)    
Predicted Functional Partners:
EHL99763.1
Putative glutamate synthase [NADPH], large subunit; KEGG: lca:LSEI_2556 0. glutamate synthase domain-containing 3; K00265 glutamate synthase (NADPH/NADH) large chain; Psort location: Cytoplasmic, score: 9.26.
    
 0.913
EHL98435.1
Aldehyde-alcohol dehydrogenase 2; KEGG: lfe:LAF_0277 0. bifunctional acetaldehyde-CoA/alcohol dehydrogenase; K04072 acetaldehyde dehydrogenase / alcohol dehydrogenase; Psort location: Cytoplasmic, score: 9.26; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
   
 0.869
allB
Allantoinase; Catalyzes the conversion of allantoin (5-ureidohydantoin) to allantoic acid by hydrolytic cleavage of the five-member hydantoin ring; Belongs to the metallo-dependent hydrolases superfamily. Allantoinase family.
 
 
 0.709
EHM01115.1
Arginine ABC transporter, ATP-binding protein ArtM; KEGG: spv:SPH_0923 2.6e-75 glutamine transport ATP-binding protein GlnQ; K02028 polar amino acid transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.598
EHM01116.1
Putative arginine ABC transporter, permease protein ArtQ; KEGG: rcm:A1E_00665 1.5e-31 sdhA; succinate dehydrogenase flavoprotein subunit; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.579
EHM00072.1
Putative 4-aminobutyrate transaminase; KEGG: clj:CLJU_c20470 1.3e-142 gabT; 4-aminobutyrate aminotransferase K07250; Psort location: Cytoplasmic, score: 9.97; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 
 0.577
birA
biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
    
 0.570
EHL99247.1
KEGG: lhe:lhv_1925 3.7e-202 biotin carboxylase; K01961 acetyl-CoA carboxylase, biotin carboxylase subunit; Psort location: Cytoplasmic, score: 9.97.
  
 0.549
EHM01117.1
ABC transporter, substrate-binding protein, family 3; KEGG: cco:CCC13826_0411 1.9e-24 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Psort location: Periplasmic, score: 9.44.
     
 0.540
EHL97102.1
Hydrolase, carbon-nitrogen family; KEGG: bce:BC4034 1.3e-57 nitrilase K08590; Psort location: Cytoplasmic, score: 9.26.
  
  
 
0.534
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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