STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylBXylulokinase; KEGG: lbr:LVIS_0184 7.0e-192 xylulose kinase; K00854 xylulokinase; Psort location: Cytoplasmic, score: 9.26. (504 aa)    
Predicted Functional Partners:
EHL96079.1
KEGG: lbr:LVIS_0960 1.3e-89 pentose-5-phosphate-3-epimerase; K01783 ribulose-phosphate 3-epimerase; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.938
EHM01141.1
KEGG: lbr:LVIS_0183 1.2e-130 xylose isomerase K01805; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.934
EHM01142.1
Hypothetical protein; KEGG: lbr:LVIS_0183 1.7e-46 xylose isomerase K01805; Psort location: Cytoplasmic, score: 9.26.
 
 
 0.926
EHL99316.1
KEGG: lgs:LEGAS_1792 3.7e-106 ulaF; L-ribulose-5-phosphate 4-epimerase; K01786 L-ribulose-5-phosphate 4-epimerase; Psort location: Cytoplasmic, score: 8.96.
 
 0.920
EHM01140.1
Hypothetical protein; KEGG: lbr:LVIS_0183 1.7e-09 xylose isomerase K01805.
 
 
 0.909
EHL98471.1
KEGG: lbr:LVIS_0144 3.6e-108 6-phosphogluconate dehydrogenase-like protein; K00033 6-phosphogluconate dehydrogenase; Psort location: Cytoplasmic, score: 9.26.
  
 
 0.890
EHL97104.1
Carbohydrate kinase, FGGY family protein; KEGG: hor:Hore_09580 5.6e-135 L-fuculokinase K00854; Psort location: Cytoplasmic, score: 9.26.
  
  
 
0.883
EHL98570.1
KEGG: lpl:lp_1541 1.3e-176 gnd2; 6-phosphogluconate dehydrogenase K00033; Psort location: Cytoplasmic, score: 8.96.
    
 0.854
EHL98571.1
Hypothetical protein; KEGG: lbr:LVIS_0094 4.1e-24 6-phosphogluconate dehydrogenase K00033.
    
 0.854
EHL98342.1
Hypothetical protein; KEGG: lbr:LVIS_1877 3.4e-105 3-carboxymuconate cyclase; K07404 6-phosphogluconolactonase.
     
 0.849
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.