STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM00934.1Polyprenyl synthetase; KEGG: lbr:LVIS_1638 1.1e-83 geranylgeranyl pyrophosphate synthase; K00805 heptaprenyl diphosphate synthase; Psort location: Cytoplasmic, score: 9.97; Belongs to the FPP/GGPP synthase family. (301 aa)    
Predicted Functional Partners:
EHL95994.1
Di-trans,poly-cis-decaprenylcistransferase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
 
 
 0.936
EHL96065.1
Putative geranyltranstransferase; KEGG: lre:Lreu_1181 5.5e-73 farnesyl-diphosphate synthase K13789; Psort location: Cytoplasmic, score: 9.97; Belongs to the FPP/GGPP synthase family.
  
  
 
0.905
EHL97523.1
KEGG: sub:SUB0102 5.4e-82 1,4-dihydroxy-2-naphthoate octaprenyltransferase; K02548 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.894
EHL97652.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: lpl:lp_1069 6.0e-131 ndh2; NADH dehydrogenase K03885; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.813
EHL97659.1
KEGG: ljf:FI9785_1764 1.2e-68 cydC; ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; Psort location: CytoplasmicMembrane, score: 7.88.
  
     0.727
EHL97658.1
Hypothetical protein; KEGG: ljf:FI9785_1764 1.3e-62 cydC; ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.725
EHL97657.1
Hypothetical protein; KEGG: ljf:FI9785_1763 1.4e-36 cydD; ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.700
EHL97656.1
KEGG: llk:LLKF_0723 1.5e-88 cydC; cytochrome d ABC transporter ATP-binding/permease; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.689
EHL97524.1
KEGG: lga:LGAS_0051 1.3e-50 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase; K03183 ubiquinone/menaquinone biosynthesis methyltransferase; Psort location: Cytoplasmic, score: 9.26; Belongs to the class I-like SAM-binding methyltransferase superfamily. MenG/UbiE family.
 
 
 0.684
EHL95896.1
Diphosphomevalonate decarboxylase; KEGG: lbr:LVIS_0859 2.5e-93 phosphomevalonate kinase; K01597 diphosphomevalonate decarboxylase.
  
 0.616
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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