STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM00937.1KEGG: lbr:LVIS_0449 1.3e-87 exopolyphosphatase; K01514 exopolyphosphatase; Psort location: Cytoplasmic, score: 9.97. (313 aa)    
Predicted Functional Partners:
EHL95169.1
Hypothetical protein; KEGG: lpl:lp_0843 7.1e-80 ppx3; exopolyphosphatase K01514; Psort location: Cytoplasmic, score: 9.97.
  
  0.994
ppk
Polyphosphate kinase 1; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.
 
  
 0.936
EHL95168.1
Hypothetical protein; KEGG: lpl:lp_0843 1.2e-47 ppx3; exopolyphosphatase K01514.
 
  
  0.903
EHL95969.1
RelA/SpoT family protein; KEGG: lbr:LVIS_0728 1.9e-166 guanosine polyphosphate pyrophosphohydrolase/synthetase; K00951 GTP pyrophosphokinase; Psort location: Cytoplasmic, score: 8.96.
   
 
 0.856
EHL95970.1
HD domain protein; KEGG: lbr:LVIS_0728 2.1e-121 guanosine polyphosphate pyrophosphohydrolase/synthetase; K00951 GTP pyrophosphokinase; Psort location: Cytoplasmic, score: 8.96.
   
 
 0.856
EHM00936.1
tryptophan--tRNA ligase; KEGG: ppe:PEPE_0256 3.0e-129 tryptophanyl-tRNA synthetase II K01867; Psort location: Cytoplasmic, score: 9.97; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.767
EHM00939.1
Hypothetical protein.
 
     0.662
EHM00940.1
Hypothetical protein.
 
     0.639
EHM00938.1
hydroxymethylglutaryl-CoA reductase, degradative; KEGG: lbr:LVIS_0450 7.7e-99 hydroxymethylglutaryl-CoA reductase; K00021 3-hydroxy-3-methylglutaryl-CoA reductase; Belongs to the HMG-CoA reductase family.
       0.584
EHM00941.1
Transcriptional regulator, Sir2 family; KEGG: lre:Lreu_0208 3.8e-74 NAD-dependent deacetylase; K12410 NAD-dependent deacetylase; Psort location: Cytoplasmic, score: 9.26.
       0.534
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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