STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM00956.1Cof-like hydrolase; KEGG: ddd:Dda3937_02521 1.4e-60 yidA; multifunctional erythrose 4-P, mannose 1-P, and alpha-D-glucose-1-P phosphatase K07024; Psort location: Cytoplasmic, score: 8.96. (271 aa)    
Predicted Functional Partners:
EHL96865.1
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
    
 0.875
EHL98779.1
HAD hydrolase, family IIB; KEGG: lmh:LMHCC_2219 2.6e-34 phosphatase YbjI K07024.
 
 
  0.860
EHM00957.1
HD domain protein; KEGG: sds:SDEG_0639 1.4e-129 dGTP triphosphohydrolase K06885; Psort location: Cytoplasmic, score: 8.96.
      0.818
EHM00958.1
KEGG: sds:SDEG_1039 6.7e-36 lipoate-protein ligase A.
       0.741
ribA
GTP cyclohydrolase II; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family.
    
 0.612
EHL99721.1
Cof-like hydrolase; KEGG: cbt:CLH_2657 1.6e-36 phosphatase YidA K07024; Psort location: Cytoplasmic, score: 8.96.
  
 
 
0.525
ribH
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.
     
 0.470
EHM00959.1
Hypothetical protein.
       0.465
EHL96864.1
KEGG: ppe:PEPE_1819 3.1e-47 riboflavin synthase subunit alpha K00793; Psort location: Cytoplasmic, score: 9.26.
     
 0.454
EHL99056.1
KEGG: bmq:BMQ_1342 2.0e-27 Cof-like hydrolase K07024.
  
 
 
0.437
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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