STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM00958.1KEGG: sds:SDEG_1039 6.7e-36 lipoate-protein ligase A. (275 aa)    
Predicted Functional Partners:
EHL98449.1
KEGG: lbr:LVIS_0180 2.5e-141 lipoate-protein ligase A; K03800 lipoate-protein ligase A; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.958
EHL98525.1
KEGG: lfe:LAF_0831 7.1e-80 lipoate-protein ligase; K03800 lipoate-protein ligase A; Psort location: Cytoplasmic, score: 9.97.
    
 0.952
lipA
Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
  
 
 0.940
EHM01109.1
KEGG: lwe:lwe0911 1.4e-60 lipoyltransferase and lipoate-protein ligase family protein K03800; Psort location: Cytoplasmic, score: 9.26.
     
  0.932
EHM01088.1
KEGG: lmo:lmo0764 4.7e-44 hypothetical protein; K03800 lipoate-protein ligase A; Psort location: Cytoplasmic, score: 9.97.
    
 0.929
EHL95118.1
KEGG: lfe:LAF_1710 2.3e-58 lipoate-protein ligase; K03800 lipoate-protein ligase A; Psort location: Cytoplasmic, score: 9.26.
    
 0.927
EHM00957.1
HD domain protein; KEGG: sds:SDEG_0639 1.4e-129 dGTP triphosphohydrolase K06885; Psort location: Cytoplasmic, score: 8.96.
  
    0.840
EHM00199.1
KEGG: slg:SLGD_00254 2.3e-97 lipoate-protein ligase A; K03800 lipoate-protein ligase A; Psort location: Cytoplasmic, score: 9.97.
    
 0.822
EHL98524.1
Hypothetical protein; KEGG: ngo:NGO1404 3.1e-08 glycine cleavage system protein H K02437.
 
 
 0.786
EHL99627.1
HesB-like protein.
  
     0.774
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.