STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM00905.1Hypothetical protein. (108 aa)    
Predicted Functional Partners:
EHM00908.1
Hypothetical protein; KEGG: hip:CGSHiEE_00155 1.4e-05 ribulose-phosphate 3-epimerase.
 
   
 0.661
EHM00906.1
Hypothetical protein.
     
 0.579
EHM00907.1
Hypothetical protein; KEGG: ddd:Dda3937_01294 2.7e-23 ISEch2 OrfB.
     
 0.579
EHL96708.1
Hypothetical protein; KEGG: ddi:DDB_G0293750 1.4e-10 dyrk2; DYRK family protein kinase; K08825 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase; Psort location: Extracellular, score: 9.64.
  
     0.404
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.