STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM00901.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (245 aa)    
Predicted Functional Partners:
EHM00902.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
    
  0.912
EHM00903.1
Putative bacitracin ABC transporter, ATP-binding protein BcrA; KEGG: bao:BAMF_3227 1.1e-40 spaF; SpaF; Psort location: CytoplasmicMembrane, score: 9.82.
  
 
  0.859
EHM00904.1
KEGG: cat:CA2559_11248 7.5e-37 ABC transporter, ATP-binding protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA.
       0.541
EHL98343.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
    
  0.444
EHL98714.1
Hypothetical protein; KEGG: ljf:FI9785_1494 2.3e-12 ABC transporter ATPase component K09687.
  
 
  0.404
EHL98032.1
KEGG: bao:BAMF_0425 8.2e-47 ydbJ; putative ABC transporter (ATP-binding protein) YdbJ; Psort location: CytoplasmicMembrane, score: 7.88.
  
 
  0.404
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.