STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM00903.1Putative bacitracin ABC transporter, ATP-binding protein BcrA; KEGG: bao:BAMF_3227 1.1e-40 spaF; SpaF; Psort location: CytoplasmicMembrane, score: 9.82. (314 aa)    
Predicted Functional Partners:
EHM00902.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.963
tagH
O-antigen export system ATP-binding protein RfbB family protein; Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system.
 
  
 
0.893
EHM00901.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
  0.859
EHL98033.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.831
EHM00904.1
KEGG: cat:CA2559_11248 7.5e-37 ABC transporter, ATP-binding protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA.
 
 
0.725
atpD
ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
 
 0.607
atpA
ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
   0.603
atpG
ATP synthase F1, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.
   
   0.586
EHM01256.1
KEGG: llk:LLKF_0402 1.1e-124 optD; oligopeptide ABC transporter ATP-binding protein K02031; Psort location: CytoplasmicMembrane, score: 9.99.
  
 
0.580
atpC
ATP synthase F1, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
   0.571
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.