STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM00856.1Hypothetical protein. (91 aa)    
Predicted Functional Partners:
EHM00855.1
KEGG: gct:GC56T3_1247 1.9e-31 ATP/cobalamin adenosyltransferase; Psort location: Cytoplasmic, score: 9.97; Belongs to the Cob(I)alamin adenosyltransferase family.
       0.598
EHM00854.1
Transcriptional regulator, GntR family; KEGG: hiq:CGSHiGG_02770 7.2e-16 D-mannonate oxidoreductase K13637; Psort location: Cytoplasmic, score: 9.97.
       0.579
EHM00857.1
Ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent; KEGG: lac:LBA0041 0. ribonucleoside triphosphate reductase; K00527 ribonucleoside-triphosphate reductase; Psort location: Cytoplasmic, score: 8.96.
       0.465
EHM00853.1
Transporter, major facilitator family protein; KEGG: hhe:HH0865 4.7e-44 hypothetical protein K03449; Psort location: CytoplasmicMembrane, score: 10.00.
       0.402
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.