STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM00859.1Hypothetical protein. (94 aa)    
Predicted Functional Partners:
EHM00860.1
Putative cystathionine beta-lyase PatB; KEGG: lcr:LCRIS_00748 2.3e-115 patB; aminotransferase; K14155 cystathione beta-lyase; Psort location: Cytoplasmic, score: 9.26.
       0.773
EHM00861.1
Hypothetical protein; KEGG: cco:CCC13826_2309 2.9e-74 hydrogenase-4 component C; Psort location: Cytoplasmic, score: 8.96.
       0.773
EHM00862.1
Putative permease; KEGG: amd:AMED_2216 1.2e-08 carbonic anhydrase fused with sulfate permease; K01673 carbonic anhydrase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.417
EHM00863.1
KEGG: lhe:lhv_1918 7.9e-81 adenine phosphoribosyltransferase; K00759 adenine phosphoribosyltransferase; Psort location: Cytoplasmic, score: 8.96.
       0.417
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.