STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM00746.1KEGG: lwe:lwe2040 2.0e-36 cell division protein DivIVA K04074; Psort location: Cytoplasmic, score: 8.96. (225 aa)    
Predicted Functional Partners:
sepF
Hypothetical protein; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.
  
  
 0.886
EHM00748.1
YGGT family protein; Psort location: CytoplasmicMembrane, score: 9.82.
  
  
 0.871
EHM00747.1
S4 domain protein; Psort location: Cytoplasmic, score: 8.96.
 
    0.851
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
  
 0.778
EHM01475.1
Penicillin-binding protein, 1A family; KEGG: lbr:LVIS_1489 1.0e-215 membrane carboxypeptidase (penicillin-binding protein); K12555 penicillin-binding protein 2A; Psort location: CytoplasmicMembrane, score: 9.82.
   
 
 0.766
EHM01476.1
Hypothetical protein; KEGG: lbr:LVIS_1489 2.1e-26 membrane carboxypeptidase (penicillin-binding protein); K12555 penicillin-binding protein 2A.
   
 
 0.766
EHL95889.1
Penicillin-binding protein, 1A family; KEGG: lbr:LVIS_0851 1.1e-241 membrane carboxypeptidase (penicillin-binding protein); K05366 penicillin-binding protein 1A.
   
 
 0.766
ftsA
Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.
 
  
 0.732
EHL96077.1
Kinase domain protein; KEGG: lbr:LVIS_0962 3.2e-164 serine/threonine kinase protein; K08884 serine/threonine protein kinase, bacterial; Psort location: CytoplasmicMembrane, score: 9.82.
  
 
 0.729
ileS
isoleucine--tRNA ligase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.
     
 0.659
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.