STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM00552.1GroES-like protein; KEGG: lpl:lp_1918 1.2e-100 oxidoreductase K00540; Psort location: Cytoplasmic, score: 9.97. (318 aa)    
Predicted Functional Partners:
EHL98435.1
Aldehyde-alcohol dehydrogenase 2; KEGG: lfe:LAF_0277 0. bifunctional acetaldehyde-CoA/alcohol dehydrogenase; K04072 acetaldehyde dehydrogenase / alcohol dehydrogenase; Psort location: Cytoplasmic, score: 9.26; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
   
 0.870
EHM00553.1
ABC transporter, substrate-binding protein, QAT family; KEGG: saa:SAUSA300_0707 6.7e-123 osmoprotectant ABC transporter, permease K05845:K05846; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.783
EHM00554.1
ABC transporter, ATP-binding protein; KEGG: llm:llmg_1700 1.8e-65 choQ; choline ABC transporter ATP binding protein K05847; Psort location: CytoplasmicMembrane, score: 9.82.
       0.747
EHM00555.1
DoxX family protein; KEGG: toc:Toce_1731 7.1e-16 FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K03885 NADH dehydrogenase; Psort location: CytoplasmicMembrane, score: 9.82.
       0.455
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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