STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM00558.1Hypothetical protein. (116 aa)    
Predicted Functional Partners:
EHM00559.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
 0.997
EHM00557.1
TIGR00268 family protein; KEGG: pmc:P9515_17581 1.1e-35 PP family ATPase K06864; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.985
EHM00560.1
Hypothetical protein; KEGG: sat:SYN_00474 1.8e-65 phosphoribosylaminoimidazole carboxylase NCAIR mutase subunit K06898.
 
  
 0.975
EHM00561.1
Hypothetical protein.
 
  
 0.948
EHM00556.1
Hypothetical protein; KEGG: mvn:Mevan_0077 0.0057 flavodoxin-like protein; K00230 protoporphyrinogen oxidase.
  
    0.439
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.