STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM00498.1Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family. (478 aa)    
Predicted Functional Partners:
EHL95604.1
Competence/damage-inducible protein CinA domain protein; Belongs to the CinA family.
  
 
 0.922
EHL95710.1
Nicotinate-nucleotide diphosphorylase; Belongs to the NadC/ModD family.
   
 0.919
nadD
Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
 
 0.902
EHM00497.1
Hypothetical protein; KEGG: hau:Haur_4290 1.3e-09 NUDIX hydrolase; K03574 7,8-dihydro-8-oxoguanine triphosphatase.
    
 0.655
nadE
NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.
  
 
 0.644
EHM00499.1
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins; Belongs to the polypeptide deformylase family.
       0.628
EHM00496.1
KEGG: scl:sce2352 6.0e-12 hypothetical protein; K03574 7,8-dihydro-8-oxoguanine triphosphatase.
    
 0.590
udk
Uridine kinase; KEGG: lbr:LVIS_1007 1.1e-88 uridine kinase K00876; Psort location: Cytoplasmic, score: 9.97.
    
 0.569
EHL99037.1
Isochorismatase family protein; KEGG: lcb:LCABL_29680 2.9e-76 pncA; nicotinamidase.
 
 
 0.531
EHM01442.1
Hydrolase, HD family; KEGG: clo:HMPREF0868_0799 1.6e-18 nadD; nicotinate-nucleotide adenylyltransferase K00969; Psort location: Cytoplasmic, score: 8.96.
     
 0.490
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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