STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM00504.1Putative azaleucine resistance protein AzlC; KEGG: apb:SAR116_0734 1.4e-19 AzlC-like protein; Psort location: CytoplasmicMembrane, score: 10.00. (261 aa)    
Predicted Functional Partners:
EHM00505.1
KEGG: apb:SAR116_0735 3.2e-06 branched-chain amino acid transport; Psort location: CytoplasmicMembrane, score: 9.82.
 
  
 0.974
EHL95973.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.754
EHL98320.1
KEGG: apb:SAR116_0735 1.5e-06 branched-chain amino acid transport; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.691
EHL95432.1
Hypothetical protein.
  
     0.533
EHL99731.1
DNA-binding helix-turn-helix protein.
 
     0.524
EHM00503.1
Serine-type D-Ala-D-Ala carboxypeptidase; KEGG: lbr:LVIS_2055 1.5e-70 D-alanyl-D-alanine carboxypeptidase; K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the peptidase S11 family.
       0.500
EHM00100.1
Hypothetical protein; KEGG: vfi:VF_1261 6.6e-06 lactoylglutathione lyase family protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.493
EHM00502.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: lbr:LVIS_2056 1.6e-137 signal transduction histidine kinase; K00936; Psort location: CytoplasmicMembrane, score: 7.88.
       0.483
EHM00722.1
Tetratricopeptide repeat protein.
  
     0.470
EHL95882.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.456
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.