STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM00397.1KEGG: bur:Bcep18194_B0836 2.7e-25 ABC amino acid transporter, periplasmic ligand binding protein K01713; Psort location: Periplasmic, score: 10.00; Belongs to the bacterial solute-binding protein 3 family. (259 aa)    
Predicted Functional Partners:
EHM00402.1
ABC transporter, permease protein; KEGG: aci:ACIAD3488 1.6e-28 amino acid ABC transporter ATP-binding protein; K02028 polar amino acid transport system ATP-binding protein K02029; Psort location: CytoplasmicMembrane, score: 10.00.
 0.993
EHM00419.1
KEGG: hpa:HPAG1_0922 2.6e-43 amino acid ABC transporter, permease protein K02029; Psort location: CytoplasmicMembrane, score: 10.00.
 0.972
EHM01116.1
Putative arginine ABC transporter, permease protein ArtQ; KEGG: rcm:A1E_00665 1.5e-31 sdhA; succinate dehydrogenase flavoprotein subunit; Psort location: CytoplasmicMembrane, score: 10.00.
 
  0.919
EHM00401.1
KEGG: eca:ECA4193 1.1e-56 putative amino acid ABC transporter ATP-binding protein; K02028 polar amino acid transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.82.
 
 0.919
EHL95611.1
Putative arginine ABC transporter, permease protein ArtQ.
  0.911
EHM01241.1
KEGG: llm:llmg_1942 9.5e-29 glnP; glutamine ABC transporter permease and substrate binding protein K02029:K02030; Psort location: CytoplasmicMembrane, score: 10.00.
 
  0.865
EHM01240.1
KEGG: llm:llmg_1942 1.3e-35 glnP; glutamine ABC transporter permease and substrate binding protein K02029:K02030; Psort location: CytoplasmicMembrane, score: 10.00.
 
  0.853
EHL96241.1
KEGG: lsl:LSL_0582 1.3e-89 glnQ; glutamine transport ATP-binding protein; K02028 polar amino acid transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
 0.814
EHM01115.1
Arginine ABC transporter, ATP-binding protein ArtM; KEGG: spv:SPH_0923 2.6e-75 glutamine transport ATP-binding protein GlnQ; K02028 polar amino acid transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.800
EHM00420.1
Putative arginine ABC transporter, ATP-binding protein ArtM; KEGG: lsl:LSL_1625 1.2e-91 amino acid ABC transporter ATP-binding protein; K02028 polar amino acid transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
 0.788
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.