STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHM00404.1Hypothetical protein; KEGG: pva:Pvag_1906 1.0e-41 2-methylcitrate dehydratase; Psort location: Cytoplasmic, score: 9.26. (445 aa)    
Predicted Functional Partners:
EHL95193.1
Putative 2-methylcitrate synthase; KEGG: ste:STER_1245 6.6e-77 citrate synthase K01647; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.923
EHM00402.1
ABC transporter, permease protein; KEGG: aci:ACIAD3488 1.6e-28 amino acid ABC transporter ATP-binding protein; K02028 polar amino acid transport system ATP-binding protein K02029; Psort location: CytoplasmicMembrane, score: 10.00.
 
    0.834
EHM00401.1
KEGG: eca:ECA4193 1.1e-56 putative amino acid ABC transporter ATP-binding protein; K02028 polar amino acid transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.82.
 
    0.816
EHM00398.1
Lyase; KEGG: stc:str1345 1.0e-151 purB2; adenylosuccinate lyase; K01756 adenylosuccinate lyase; Psort location: Cytoplasmic, score: 9.97.
 
     0.799
EHM00403.1
KEGG: bmd:BMD_1183 1.0e-23 GNAT family acetyltransferase.
  
    0.794
EHL98500.1
Putative carboxyvinyl-carboxyphosphonate phosphorylmutase; KEGG: ana:all1863 4.6e-53 carboxyphosphonoenolpyruvate phosphonomutase; K03417 methylisocitrate lyase; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.775
EHM00400.1
3-dehydroquinate synthase; KEGG: bld:BLi00258 4.4e-48 hypothetical protein; K00120.
 
     0.769
EHL98499.1
Hypothetical protein; KEGG: bav:BAV3268 7.2e-16 bcpA; carboxyvinyl-carboxyphosphonate phosphorylmutase; Psort location: Cytoplasmic, score: 9.26.
 
  
 0.762
EHL97094.1
KEGG: rsl:RPSI07_0074 8.6e-52 putative CoA-transferase family III, CaiB/BaiF family; Psort location: Cytoplasmic, score: 9.97.
 
 
  0.758
EHM00397.1
KEGG: bur:Bcep18194_B0836 2.7e-25 ABC amino acid transporter, periplasmic ligand binding protein K01713; Psort location: Periplasmic, score: 10.00; Belongs to the bacterial solute-binding protein 3 family.
 
    0.739
Your Current Organism:
Lactobacillus parafarraginis
NCBI taxonomy Id: 797515
Other names: L. parafarraginis F0439, Lactobacillus parafarraginis F0439, Lactobacillus parafarraginis str. F0439, Lactobacillus parafarraginis strain F0439, Lactobacillus sp. oral taxon 418 str. F0439
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